Peptide Database

Peptide NameSd1

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC186H297N65O61S6

DescriptionStandard

        RHCLSQSHRFKGMCVSSNNCANVCRTESFPDGECKSHGLER
    

Molecular Weight4612.14 Da

Isoelectric Point (pI)8.43

Net Charge (pH 7.0)1.98

Net Charge (pH 7.4) 1.54

Charge Density (pH 7.0) 0.0483

GRAVY Index-0.83

Hydrophobic Moment 0.43

Boman Index-0.26

Instability Index49.59

Aliphatic Index 35.61

Aromaticity 0.0488

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2067.38

LogP -29.99

H-bond Donors 78.0

H-bond Acceptors 72.0

Rotatable Bonds 155.0

Heavy Atoms 318.0

Ring Count 6.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0188453 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza sativa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)