Peptide Database

Peptide NameAntimicrobial peptide GAPDH1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC156H262N48O41

DescriptionStandard

        VKVGINGFGRIGRLVTRAAFHSKKVEIVAIND
    

Molecular Weight3466.05 Da

Isoelectric Point (pI)11.00

Net Charge (pH 7.0)3.83

Net Charge (pH 7.4) 3.56

Charge Density (pH 7.0) 0.1195

GRAVY Index0.26

Hydrophobic Moment 0.92

Boman Index0.07

Instability Index-5.81

Aliphatic Index 115.62

Aromaticity 0.0625

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1459.10

LogP -13.39

H-bond Donors 52.0

H-bond Acceptors 46.0

Rotatable Bonds 119.0

Heavy Atoms 245.0

Ring Count 3.0

Amide Bonds 33.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0090978 VERIFIED: NO

Provenance & Taxonomy

OrganismBoleophthalmus pectinirostris [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0275471 VERIFIED: YES

Provenance & Taxonomy

OrganismEpinephelus coioides [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)