Peptide Database

Peptide NamePeptide chain B in PDB 4OO6

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC46H71N17O12

DescriptionStandard

        RGRYRSPY
    

Molecular Weight1054.16 Da

Isoelectric Point (pI)10.90

Net Charge (pH 7.0)2.76

Net Charge (pH 7.4) 2.55

Charge Density (pH 7.0) 0.3448

GRAVY Index-2.36

Hydrophobic Moment 0.24

Boman Index-0.83

Instability Index77.42

Aliphatic Index 0.00

Aromaticity 0.2500

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 504.62

LogP -5.39

H-bond Donors 20.0

H-bond Acceptors 15.0

Rotatable Bonds 31.0

Heavy Atoms 75.0

Ring Count 3.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0064485 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4OO6 receptor chain A

MethodProtein-peptide complex structure