Peptide Database

Peptide NamePeptide chain C in PDB 3PDO

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length17 amino acids

Chemical FormulaC83H146N22O21S3

DescriptionStandard

        PVSKMRMATPLLMQALP
    

Molecular Weight1884.38 Da

Isoelectric Point (pI)11.01

Net Charge (pH 7.0)1.96

Net Charge (pH 7.4) 1.90

Charge Density (pH 7.0) 0.1151

GRAVY Index0.39

Hydrophobic Moment 0.45

Boman Index0.16

Instability Index49.64

Aliphatic Index 97.65

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 668.82

LogP -4.28

H-bond Donors 23.0

H-bond Acceptors 26.0

Rotatable Bonds 60.0

Heavy Atoms 129.0

Ring Count 3.0

Amide Bonds 17.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0010656 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3PDO receptor chain A

MethodProtein-peptide complex structure