Peptide Database

Peptide NameCyclotide vitri peptide 38

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC133H193N31O40S6

DescriptionStandard

        GDTCYETCFTGFCFIGGCKCDFPVCVKN
    

Molecular Weight3058.53 Da

Isoelectric Point (pI)4.56

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.60

Charge Density (pH 7.0) -0.0463

GRAVY Index0.38

Hydrophobic Moment 0.26

Boman Index0.21

Instability Index17.18

Aliphatic Index 34.64

Aromaticity 0.1786

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1128.18

LogP -11.53

H-bond Donors 44.0

H-bond Acceptors 45.0

Rotatable Bonds 94.0

Heavy Atoms 210.0

Ring Count 6.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0360155 VERIFIED: NO

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial