Peptide Database

Peptide NameFa-AMP1

Function Ontology

—

Standard StatusStandard

Sequence Length21 amino acids

Chemical FormulaC88H131N27O32S4

DescriptionStandard

        SQYGYCGSTRAYCGVGCQSNC
    

Molecular Weight2207.40 Da

Isoelectric Point (pI)7.62

Net Charge (pH 7.0)0.42

Net Charge (pH 7.4) 0.15

Charge Density (pH 7.0) 0.0199

GRAVY Index-0.36

Hydrophobic Moment 0.30

Boman Index-0.00

Instability Index18.94

Aliphatic Index 18.57

Aromaticity 0.1429

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4720.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 978.10

LogP -16.11

H-bond Donors 39.0

H-bond Acceptors 37.0

Rotatable Bonds 68.0

Heavy Atoms 151.0

Ring Count 3.0

Amide Bonds 23.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0395293 VERIFIED: YES

Provenance & Taxonomy

OrganismCapsicum annuum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)