Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length26 amino acids

Chemical FormulaC114H189N41O40S4

DescriptionStandard

        TCESQSHRFKGTCVRRSNCAAVCQTE
    

Molecular Weight2902.23 Da

Isoelectric Point (pI)8.52

Net Charge (pH 7.0)1.46

Net Charge (pH 7.4) 1.15

Charge Density (pH 7.0) 0.0560

GRAVY Index-0.70

Hydrophobic Moment 0.42

Boman Index-0.30

Instability Index68.45

Aliphatic Index 30.00

Aromaticity 0.0385

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1356.47

LogP -21.40

H-bond Donors 53.0

H-bond Acceptors 47.0

Rotatable Bonds 97.0

Heavy Atoms 199.0

Ring Count 2.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0040498 VERIFIED: YES

Provenance & Taxonomy

OrganismCoffea arabica [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)