Peptide Database

Peptide NamePeptide chain C in PDB 3BW9

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC63H93N13O20S2

DescriptionStandard

        CPSQEPMSIYVY
    

Molecular Weight1416.62 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.25

Net Charge (pH 7.4) -1.47

Charge Density (pH 7.0) -0.1041

GRAVY Index-0.11

Hydrophobic Moment 0.10

Boman Index0.18

Instability Index113.47

Aliphatic Index 56.67

Aromaticity 0.1667

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 527.15

LogP -3.86

H-bond Donors 18.0

H-bond Acceptors 21.0

Rotatable Bonds 40.0

Heavy Atoms 98.0

Ring Count 4.0

Amide Bonds 12.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0373929 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3BW9 receptor chain A

MethodProtein-peptide complex structure