Peptide Database

Peptide NameColicin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length334 amino acids

Chemical FormulaC1604H2534N416O485S3

DescriptionStandard

        MMQAHSFRLAPAGTTQLSVAAGTIAITAGSSLTLEAAIQAGIQALKALGGAVLDRATGVGIGLLLYSPSLGNSDLYPPTSLSLPAKDLIPDLPENLPEIAAAGGTVDLPYRVYGDRSKYSVIATQANGGLSPKVPVRALTLDPVANAYTFTTADTPPITLTFPIAVPGDSSTVTPVQPVEIPTYTGVTLTPIAVKAEPLPAADQWDIRDAIYTFPADSGLPPIYVVLSESLDSGIFTRRQLQRKFKAHAKIFGVTEENSNTETLTKFRDGILVHLRDKATIEKGTYHHAKGSRVFFNPNTSVVVILEEDGSFLSGWHIEPGSSQYINYMVNEVL
    

Molecular Weight35501.97 Da

Isoelectric Point (pI)5.38

Net Charge (pH 7.0)-6.94

Net Charge (pH 7.4) -7.53

Charge Density (pH 7.0) -0.0208

GRAVY Index0.06

Hydrophobic Moment 0.63

Boman Index0.16

Instability Index41.91

Aliphatic Index 97.57

Aromaticity 0.0749

Extinction Coeff. Reduced 28880.00

Extinction Coeff. Oxidized 28880.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0409537 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas batumici [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal

MethodQualitative functional evidence