Peptide Database

Peptide NamePPT

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC138H222N42O50S4

DescriptionStandard

        RTCESQSHKFKGTCLSETNCASVCKTEGFTGG
    

Molecular Weight3397.75 Da

Isoelectric Point (pI)7.88

Net Charge (pH 7.0)0.81

Net Charge (pH 7.4) 0.49

Charge Density (pH 7.0) 0.0254

GRAVY Index-0.62

Hydrophobic Moment 0.42

Boman Index-0.13

Instability Index46.52

Aliphatic Index 24.38

Aromaticity 0.0625

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1514.21

LogP -23.90

H-bond Donors 58.0

H-bond Acceptors 56.0

Rotatable Bonds 115.0

Heavy Atoms 234.0

Ring Count 3.0

Amide Bonds 33.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0076391 VERIFIED: YES

Provenance & Taxonomy

OrganismVernicia fordii [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)