Peptide Database

Peptide NameAntimicrobial peptide, Lci

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length94 amino acids

Chemical FormulaC454H707N111O134S3

DescriptionStandard

        MKFKKVLTGSALSLALLMSAAPAFAASPTASASMENSPISTKADAGINAIKLVQSPNGNFAASFVLDGTKWIFKSKYYDSSKGYWVGIYESVDK
    

Molecular Weight9960.33 Da

Isoelectric Point (pI)9.44

Net Charge (pH 7.0)3.50

Net Charge (pH 7.4) 3.25

Charge Density (pH 7.0) 0.0372

GRAVY Index0.08

Hydrophobic Moment 0.51

Boman Index0.17

Instability Index24.80

Aliphatic Index 80.11

Aromaticity 0.1170

Extinction Coeff. Reduced 16960.00

Extinction Coeff. Oxidized 16960.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 3910.55

LogP -39.78

H-bond Donors 136.0

H-bond Acceptors 141.0

Rotatable Bonds 326.0

Heavy Atoms 702.0

Ring Count 17.0

Amide Bonds 98.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0328479 VERIFIED: NO

Provenance & Taxonomy

OrganismBacillus amyloliquefaciens subsp. plantarum [Bacterium]

FamilyDefensin

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial