Peptide Database

Peptide NamePeptide chain C in PDB 5J3T

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length25 amino acids

Chemical FormulaC125H186N30O34

DescriptionStandard

        SILYAGPTFTHSPAASNLPIPTFLH
    

Molecular Weight2652.99 Da

Isoelectric Point (pI)6.66

Net Charge (pH 7.0)-0.37

Net Charge (pH 7.4) -0.68

Charge Density (pH 7.0) -0.0147

GRAVY Index0.36

Hydrophobic Moment 0.29

Boman Index0.37

Instability Index68.48

Aliphatic Index 90.00

Aromaticity 0.1200

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 968.62

LogP -8.66

H-bond Donors 32.0

H-bond Acceptors 36.0

Rotatable Bonds 73.0

Heavy Atoms 189.0

Ring Count 9.0

Amide Bonds 25.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0328767 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5J3T receptor chain A

MethodProtein-peptide complex structure