Peptide Database

Peptide NamePeptide chain D in PDB 3N5E

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC43H71N13O13S

DescriptionStandard

        LSCQLYQR
    

Molecular Weight1010.17 Da

Isoelectric Point (pI)8.22

Net Charge (pH 7.0)0.75

Net Charge (pH 7.4) 0.53

Charge Density (pH 7.0) 0.0936

GRAVY Index-0.44

Hydrophobic Moment 0.38

Boman Index-0.22

Instability Index40.08

Aliphatic Index 97.50

Aromaticity 0.1250

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 455.56

LogP -4.45

H-bond Donors 17.0

H-bond Acceptors 15.0

Rotatable Bonds 33.0

Heavy Atoms 70.0

Ring Count 1.0

Amide Bonds 9.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0325747 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3N5E receptor chain A

MethodProtein-peptide complex structure