Peptide Database

Peptide NamePeptide chain B in PDB 5GMY

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length7 amino acids

Chemical FormulaC34H55N11O11S

DescriptionStandard

        RYNVTAC
    

Molecular Weight825.93 Da

Isoelectric Point (pI)8.22

Net Charge (pH 7.0)0.75

Net Charge (pH 7.4) 0.53

Charge Density (pH 7.0) 0.1070

GRAVY Index-0.21

Hydrophobic Moment 0.28

Boman Index-0.16

Instability Index48.44

Aliphatic Index 55.71

Aromaticity 0.1429

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 383.37

LogP -4.62

H-bond Donors 15.0

H-bond Acceptors 13.0

Rotatable Bonds 24.0

Heavy Atoms 57.0

Ring Count 1.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0356219 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5GMY receptor chain A

MethodProtein-peptide complex structure