Peptide Database

Peptide NameLumbrican(6-34)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive

Antimicrobial ▸ Antifungal

Toxicity / Safety ▸ Blood cell toxicity ▸ Hemolysis ▸ Hemolytic

Venom / Toxin ▸ General toxin ▸ Toxic

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC162H250N48O45

DescriptionStandard

        RQKDKRPYSERKNQYTGPQFLYPPERIPP
    

Molecular Weight3590.01 Da

Isoelectric Point (pI)9.99

Net Charge (pH 7.0)3.76

Net Charge (pH 7.4) 3.54

Charge Density (pH 7.0) 0.1297

GRAVY Index-2.02

Hydrophobic Moment 0.50

Boman Index-0.52

Instability Index53.42

Aliphatic Index 26.90

Aromaticity 0.1379

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1536.45

LogP -14.49

H-bond Donors 51.0

H-bond Acceptors 49.0

Rotatable Bonds 112.0

Heavy Atoms 255.0

Ring Count 10.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0423447 VERIFIED: YES

Provenance & Taxonomy

OrganismLumbricus rubellus [Animal]

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial Antifungal Anti-Gram-positive Anti-Gram-negative

TargetPseudomonas putida ATCC 17426

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