Peptide Database

Peptide NameCathelicidin-derived antimicrobial peptide 1 isoform c

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length183 amino acids

Chemical FormulaC895H1473N265O273S12

DescriptionStandard

        MKMKVQVRSLILLAVAVLQVRSQNQTETRYEDIILVALPQLLPGEEQAFRPILNQLQVKTLNTEDVDQSEVSVRLTFPIQETFCSKSQGQPGKPCPLKKNGKLMMCSMKVRHPILEASNNLNTDLSTFVCEYMDAEDALQQKIRTRRSKVRICSRGKNCVSRPGGGSFNDEFIRDHSDGNRFA
    

Molecular Weight20698.66 Da

Isoelectric Point (pI)9.11

Net Charge (pH 7.0)5.64

Net Charge (pH 7.4) 5.19

Charge Density (pH 7.0) 0.0308

GRAVY Index-0.44

Hydrophobic Moment 0.68

Boman Index-0.12

Instability Index51.89

Aliphatic Index 84.10

Aromaticity 0.0492

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8802.52

LogP -111.38

H-bond Donors 306.0

H-bond Acceptors 293.0

Rotatable Bonds 706.0

Heavy Atoms 1445.0

Ring Count 20.0

Amide Bonds 206.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0401538 VERIFIED: NO

Provenance & Taxonomy

OrganismOncorhynchus mykiss [Animal]

Familycathelicidin

Tax ID8022

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial