Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length600 amino acids

Chemical FormulaC2858H4458N786O866S16

DescriptionStandard

        MPGAARLNDIGSGHDCFPETPIIEGSSDVIINGQPAARQGDAVLLHGCPCPNAPHGVHSRKIAEGSSTVIINGKNAARIGDGINCGGVIVSGSGNVIIGDTPHRSPVQDCAKQAALTRAPLLALTPMLTVPPVYAKSCLLADGCTKAGTEEEPVKNFGDMVLFAQSEQDDCCGYGHHDESHEVVQHAQVAKKKEKKTVATAPSSTKAPELEPWYKTLFDLLVATDDKTHSPLPTSKSVVHPVAVEKQEEPTVANAGVGLLTATGVMTQVWGEWSLGGVLSAARGVPYIGALASALYIPSAGAGSDKVPGRDEHWLEDELRRKGWAGETATTRVRFFWRPDIHGKMQVYGVHTGEGTPYEGVRVANMVWDAKVQGYTFTPAPGVDGPTITWTPEKPEGAEPVTHTGSPVNPIDQPTILIYPIPGDEIETSTPPFPVPDEQDFNDWILVFPADSGVKPVYVYLQSARNKPGAVTGKGEVLSGEGKWLEAASSGLGAPVPAQVADKLRGQKFERFDDFREAFWLAVAECPELIEQFSPANKALIKKGRSPYAVPKEQYGGRKVFEIHHKIRIVDGGSVYDIDNLSIATPKRHVAIHSKSKENS
    

Molecular Weight64197.76 Da

Isoelectric Point (pI)5.78

Net Charge (pH 7.0)-12.85

Net Charge (pH 7.4) -14.33

Charge Density (pH 7.0) -0.0214

GRAVY Index-0.31

Hydrophobic Moment 0.68

Boman Index0.06

Instability Index42.32

Aliphatic Index 78.02

Aromaticity 0.0683

Extinction Coeff. Reduced 81360.00

Extinction Coeff. Oxidized 81985.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0330760 VERIFIED: YES

Provenance & Taxonomy

OrganismPectobacterium parmentieri [Bacterium]

FamilyPyocin/Colicin

Tax ID1905730

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Hydrolase Non-hemolytic Non-ribosomal

TargetEscherichia coli