Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length688 amino acids

Chemical FormulaC3259H5191N913O1034S9

DescriptionStandard

        MGDLNLKDKHMPQNVITLPPTIVTPGQPLPRPLGPLSGAGVIARPLRWDGTIPANHELDAFFSKRGIRNEQYTISIIVTASSTQQNIHQSYIDFLPLLPADVDAEISAGVGDYPFSELEKSTIEKNVVDSLISQRAAELAKSNEGAHAFFGRHVLAVDVKKNAVDFLNIFQTRRDLGSPLDVYKSWEASVTAAYRAKILEEKIRMLTERSVSLSHTIAAAQAREDARIAAETESTRLAVEAAEHARLAAETAEQARVAVEAEAKRVADEQALLAAEAEARRVAAEAAEQARMEAETQAQRDADEHARVTAEAQALEAGKTLRLPEAGTPQLGAVAGVISVTAGSGLFLDATIQAAIEILTALAGTAVSSTTAVGIGTLLYSPSLGNGELPERMLDLPARVLMPDLPDALNDVAATGGTVDMPYRIYGYQSKYSVVATQVEGGFSPKVPVRALILDPVANAYTFTTSDTPPITLTFPIAAPGNSSTTTVAQPVETPAYAGITLEPIEVKAEPLPGTRQMDIRDAIYVYPLNSGLPPVYVVFNSPYEGGTTKGEHSGRLYNPDKAGGPTQNLDWTTASVTQDGIDLVKLHTGRFGSSDANTIMIDRLEKILRGELAVTDTDKRFYTHELRELERYRALGVADGVQGNVWNNAHTAALEDYRINENRDFLYTEAAQSAGDKQDHADALRGQ
    

Molecular Weight73995.16 Da

Isoelectric Point (pI)4.97

Net Charge (pH 7.0)-27.22

Net Charge (pH 7.4) -28.27

Charge Density (pH 7.0) -0.0396

GRAVY Index-0.22

Hydrophobic Moment 0.75

Boman Index0.03

Instability Index33.38

Aliphatic Index 89.74

Aromaticity 0.0596

Extinction Coeff. Reduced 53290.00

Extinction Coeff. Oxidized 53290.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0261025 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas syringae pv. papulans [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal