Peptide Database

Peptide NamePeptide chain E in PDB 5JTQ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC232H351N53O62

DescriptionStandard

        DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP
    

Molecular Weight4874.59 Da

Isoelectric Point (pI)6.19

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.46

Charge Density (pH 7.0) -0.0057

GRAVY Index-0.04

Hydrophobic Moment 0.55

Boman Index0.13

Instability Index15.97

Aliphatic Index 109.29

Aromaticity 0.1667

Extinction Coeff. Reduced 11460.00

Extinction Coeff. Oxidized 11460.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1848.97

LogP -8.81

H-bond Donors 62.0

H-bond Acceptors 62.0

Rotatable Bonds 154.0

Heavy Atoms 347.0

Ring Count 11.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0209111 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5JTQ receptor chain B

MethodProtein-peptide complex structure