Peptide Database

Peptide NameGlycoside hydrolase family 24

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length177 amino acids

Chemical FormulaC833H1335N243O243S9

DescriptionStandard

        MSGPRMPVALLRKGAIPAALLAALTSPLAFQTLERWEGNVLQVYADHLAGGLPTYCAGRTNPAAVVGTKLSSDQCQAINKTTLLEYGYAVLGCVNWDYLTPQRLIGLTMFAVNVGKNGACGSQAVRQINAGNLRAGCDLIARTPDGRPNWSYADGVFVQGLQNRRQAERALCLEVQP
    

Molecular Weight18930.58 Da

Isoelectric Point (pI)9.02

Net Charge (pH 7.0)4.54

Net Charge (pH 7.4) 4.16

Charge Density (pH 7.0) 0.0256

GRAVY Index0.01

Hydrophobic Moment 0.63

Boman Index0.08

Instability Index39.51

Aliphatic Index 93.79

Aromaticity 0.0678

Extinction Coeff. Reduced 25440.00

Extinction Coeff. Oxidized 25815.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 7780.20

LogP -86.02

H-bond Donors 272.0

H-bond Acceptors 258.0

Rotatable Bonds 611.0

Heavy Atoms 1328.0

Ring Count 26.0

Amide Bonds 197.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0087221 VERIFIED: NO

Provenance & Taxonomy

OrganismDelftia acidovorans [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Hydrolase Non-hemolytic Non-ribosomal

RECORD: Rec_0185822 VERIFIED: NO