Peptide Database

Peptide NamePeptide chain B in PDB 5F5O

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length26 amino acids

Chemical FormulaC127H193N31O41S2

DescriptionStandard

        WDSSYMQQVSEGLMTGKVPIDQVFGA
    

Molecular Weight2874.20 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.24

Net Charge (pH 7.4) -2.45

Charge Density (pH 7.0) -0.0860

GRAVY Index-0.14

Hydrophobic Moment 0.43

Boman Index0.16

Instability Index40.68

Aliphatic Index 67.31

Aromaticity 0.1154

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 6990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1166.16

LogP -11.48

H-bond Donors 39.0

H-bond Acceptors 41.0

Rotatable Bonds 93.0

Heavy Atoms 201.0

Ring Count 5.0

Amide Bonds 28.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0401132 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5F5O receptor chain A

MethodProtein-peptide complex structure