Peptide Database

Peptide NameAh-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length52 amino acids

Chemical FormulaC251H365N81O77S9

DescriptionStandard

        LCNERPSQTWSGNCGNTAAHCDKQCQDWEKASHGACCHKRENHWKCFCYFNC
    

Molecular Weight6037.67 Da

Isoelectric Point (pI)7.71

Net Charge (pH 7.0)1.03

Net Charge (pH 7.4) 0.48

Charge Density (pH 7.0) 0.0197

GRAVY Index-1.05

Hydrophobic Moment 0.46

Boman Index-0.21

Instability Index39.17

Aliphatic Index 15.19

Aromaticity 0.1154

Extinction Coeff. Reduced 17990.00

Extinction Coeff. Oxidized 18490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2581.20

LogP -33.02

H-bond Donors 97.0

H-bond Acceptors 91.0

Rotatable Bonds 194.0

Heavy Atoms 418.0

Ring Count 14.0

Amide Bonds 59.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0384274 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

FamilyDefensin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial