Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length393 amino acids

Chemical FormulaC1903H2993N533O559S9

DescriptionStandard

        MARNRLPPIKNPPSGDGHHVTYRDMTPSERAEQEARQNAYEQMLVRQQAYADSLASPPRKQQAMAGCTFTKSCKLPDGVMDYLSPSGAIPTDAIKDYGELVLLGGRATDATGNIPLKKISGALPAALGSLALGGEAVASAGAGVATGGVAAGALAGVVAMLWPSSLGDSALYTPEQLDALKEGRTRVRLHLEQRPDGTLKGYGYNTQKQRGWEMVPVVRFTAKGQQQVADFGDGVTLIWTPAVDPSSTSGIPPLEAAPQAPHIWIFPPTEQADTLIVNPIYPPEYKDFILVFPPGSGVRPLYIVLNLLRGQNYHPKPQNLPAFPGLKWSKPKTPKKGGGLRDRWKDKDGTIYEWDSQHGRLEKYNKRGKHLGEFDPITGQQTKPADKTRVIEP
    

Molecular Weight42570.94 Da

Isoelectric Point (pI)9.15

Net Charge (pH 7.0)7.12

Net Charge (pH 7.4) 6.42

Charge Density (pH 7.0) 0.0181

GRAVY Index-0.49

Hydrophobic Moment 0.64

Boman Index-0.01

Instability Index40.05

Aliphatic Index 75.78

Aromaticity 0.0738

Extinction Coeff. Reduced 59360.00

Extinction Coeff. Oxidized 59485.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0326309 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. LAMO17WK12:I10 [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal