Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC157H239N49O60S8

DescriptionStandard

        QQCGSQAGGALCANGLCCSQYGYCGTTPDYCGQGCQSQCN
    

Molecular Weight4029.39 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.32

Net Charge (pH 7.4) -1.65

Charge Density (pH 7.0) -0.0330

GRAVY Index-0.36

Hydrophobic Moment 0.30

Boman Index0.05

Instability Index21.41

Aliphatic Index 27.00

Aromaticity 0.0750

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1776.38

LogP -30.88

H-bond Donors 66.0

H-bond Acceptors 67.0

Rotatable Bonds 128.0

Heavy Atoms 274.0

Ring Count 4.0

Amide Bonds 48.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0236858 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum lycopersicum [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)