Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length600 amino acids

Chemical FormulaC2873H4472N782O870S16

DescriptionStandard

        MPGAARLNDIGSGHDCFPETPITEGSPDVIINGQPAARQGDAVLLHGCPCPNAPHGVHSRKIAEGSSTVIINGKPAARIGDGINCGGVIVSGSGNVIIGDTPHRSPVQECAKQAVLTRAPLLALTPMLTVPPVYAKSCLLADGCTKAGTEEEPVENFGDMVLFAQPEQDDCCGYGYHDENHEVVQHAQAAKKKEKKTVATAPSPTKVPELEPWYKTLFDLLVATDDKTHSPLPTSKSVVHPVVVEKQEEPTVASAGVGLLTTTGVMTQVWGEWSLGGVLSAARGVPYIGALASALYIPSAGEGSDKVPGRDEHWLEDELRRKGWAGETATTRVRFFWRPDIHGKMQVYGVHTGEGTPYEGVRVANMVWDAKVQGYTFTPAPGVDGPTITWTPEKPEGAEPVTHTGSPVNPIDQPTILIYPIPGDEIDTSTPPFPVPDEQDFNDWILVFPADSGVKPVYVYLQSARNKPGTVTGKGEVLSGEGKWLEAASSGLGAPVPAQVADKLRGQKFERFDDFREAFWLAVAECPELIEQFSPANKALIKKGRSPYAVPKEQYGGRKVFEIHHKIRIVDGGSVYDIDNLSIATPKRHVAIHSKSKENS
    

Molecular Weight64400.00 Da

Isoelectric Point (pI)5.56

Net Charge (pH 7.0)-15.93

Net Charge (pH 7.4) -17.37

Charge Density (pH 7.0) -0.0265

GRAVY Index-0.32

Hydrophobic Moment 0.67

Boman Index0.06

Instability Index41.90

Aliphatic Index 77.50

Aromaticity 0.0700

Extinction Coeff. Reduced 82850.00

Extinction Coeff. Oxidized 83475.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0310544 VERIFIED: YES

Provenance & Taxonomy

OrganismPectobacterium wasabiae CFBP 3304 [Bacterium]

FamilyColicin/Pyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal

TargetEscherichia coli (Gram-negative)