‹ ›
MYP_097604
← PREVIOUS NEXT → BACK
Basic Information
Type VI secretion system tip protein VgrG
Antimicrobial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative
Antimicrobial ▸ Antibiotic activity
Enzyme / Catalytic activity ▸ Hydrolase
Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic
Standard
1196 amino acids
C5879H9106N1664O1814S38
Standard
Sequence
MDNWLALFDGQTRYFLDINDSSVKPDVLRFYGREALSEPFRWDIEFTTLQANIPPEQVLMKYASFRMRSGKSVHGMVTRLEWLSTSKDQSHYRLTLSSRLALLGYTRQCAVYQNQSVPEVVEQVLRKHGLEGPDFEFRLEHTYPPREIITQWQETDLQFIQRILSEVGIYWRTMMDDVRDLDTYIFADSQLNYQFDVRLPYSEPSGLFDGAAESVWDVRTWHNIATGTVVTRDYNYRTATTPMDAAVSVRSDAVTTGEHYRYAAPYREAGDDASPEPETESGAFYARLHHERELNRSARIHLFSNAAHLTPGQVLEPQGDVITALQEGVFLTLVTFRGARDSRLHVSVWGQPYTERYCFRPVEIPRPVIPGTLPARIESREKNDTYAHLDEQGRYRVKLDFDREGTESGYGYLWLRMAKPYAGDTLGWHTPLTDGTEVAIAYSNGDIDLPYIAYALHDSEHPDHVNRDNHTRNVLRTPANNKLRMEDRRGEEHIKLATEYGKTQLNSGHLVNSKGETRGRGAELRTDEWGTLRAGKGLFVSADAQAKAQGEVLDMSAALEEIDRLNQQLQQMEIAAEQAQALKADVDSQIRMFEQRLKPLSEALLMSAPEGMALTSGEHMQMTATKNVAINAGGDASIGAMGNMTALAGDKLGLFARTGQLSMKASEGPVEMQAQNAAMRLFAEKKLTMSSASDISFAGKKRITLVGGGSYLRLEAGKVEYGTTASYLRKVKRTMAASASAKPVQAVSLPPPATMREFNPETLAPWVTPVYAKSCLKEKGCTDAGTAEEPVDNFGQMTIFAQPVEDDCCGYGHQHEHADDEVVQHAQSAKKRKPDAGGENAPAQATAAPLALGAATGLMTQVWGEWSLTGALGAARGIPYVGAMMSALYVPSAGEGSDRVPGRDEFWYEEELRQKSLTGAKATTRVRFFWRQDEQGNMRVYGVHTGEGTPYEGVRTAEMKWVEKNSRYEFKPAHGADVPLITWTPERPEGGDLPAHTGSDIKPIDQATILVTPIPDGKDEYTTPPFPMPEERDLNDYILVFPAGSGIKPVYVYLKDDSRNQPGTATGNGVKLSGDKPWLDLSVTNKGNGAPIPSHIADKLRGRSYGSFDDLREDLWEEISNDPKLMAQFGEDNQERISNGLAPWVPSDGYYHGPNEVVKKFQIHHDQAIEDGGGVYDLDNLRIVTPRLHDEIHYRR
Physicochemical Analysis
133337.72 Da
5.44
-34.44
-36.76
-0.0288
-0.56
0.74
-0.05
35.71
71.91
0.0870
187020.00
187395.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
Structural Visualization
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.
2D CHEMICAL STRUCTURE
Drag to move
Drag to move. Use the buttons to zoom.
Experimental Records
RECORD: Rec_0062895 VERIFIED: NO
Provenance & Taxonomy
Salmonella enterica subsp. arizonae [Bacterium]
Colicin/Pyocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Hydrolase
Escherichia coli
PaperSKESA: strategic k-mer extension for scrupulous assemblies PMID30286803 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/30286803/
RECORD: Rec_0078219 VERIFIED: NO
Provenance & Taxonomy
Salmonella arizonae [Bacterium]
Colicin/Pyocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Hydrolase Non-hemolytic Non-ribosomal
Escherichia coli
Qualitative functional evidence
Evidence URLhttps://www.uniprot.org/uniprotkb/A9MMY5/entry; https://bblserver.org.in/ampdb/
RECORD: Rec_0261455 VERIFIED: NO
Provenance & Taxonomy
Salmonella enterica subsp. arizonae serovar 41:z4 [Bacterium],z23:- [Animal]
Colicin/Pyocin
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Hydrolase
Escherichia coli
PaperSKESA: strategic k-mer extension for scrupulous assemblies PMID30286803 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/30286803/
RECORD: Rec_0295689 VERIFIED: NO
Provenance & Taxonomy
Salmonella enterica [Bacterium]
Colicin/Bacteriocin
28901
Structure & Mods
linear polypeptide [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Hydrolase Non-hemolytic
Escherichia coli (Gram-negative)
Qualitative functional evidence
Evidence URLhttps://www.uniprot.org/uniprotkb/A0A5T8WNA1/entry