Peptide Database

Peptide NamePeptide chain B in PDB 1R1S

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC24H38N6O11

DescriptionStandard

        PDENL
    

Molecular Weight586.59 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.04

Net Charge (pH 7.4) -2.10

Charge Density (pH 7.0) -0.4075

GRAVY Index-1.66

Hydrophobic Moment 0.31

Boman Index-0.25

Instability Index-7.08

Aliphatic Index 78.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 283.42

LogP -2.98

H-bond Donors 9.0

H-bond Acceptors 9.0

Rotatable Bonds 18.0

Heavy Atoms 41.0

Ring Count 1.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0264604 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1R1S receptor chain A

MethodProtein-peptide complex structure