Peptide Database

Peptide NamePathogenesis-related thaumatin-like protein (Fragment)

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length180 amino acids

Chemical FormulaC825H1251N245O264S15

DescriptionStandard

        RGINNCPYTVWAAAVPGGGRRLDRGQTWTINVAAGTAGARIWARTNCNFDGNGRGSCQTGDCGGVLQCTAYGRPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGIRCTADINGQCPSVLKAPGGCNNPCTVFKTDQYCCNSGSCSATDYSRFFKTRCPDAYSYPQDDP
    

Molecular Weight19306.22 Da

Isoelectric Point (pI)7.53

Net Charge (pH 7.0)0.63

Net Charge (pH 7.4) 0.20

Charge Density (pH 7.0) 0.0035

GRAVY Index-0.43

Hydrophobic Moment 0.73

Boman Index-0.02

Instability Index24.60

Aliphatic Index 49.39

Aromaticity 0.1056

Extinction Coeff. Reduced 26930.00

Extinction Coeff. Oxidized 27805.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8195.60

LogP -110.50

H-bond Donors 294.0

H-bond Acceptors 280.0

Rotatable Bonds 603.0

Heavy Atoms 1349.0

Ring Count 34.0

Amide Bonds 202.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0361227 VERIFIED: NO

Provenance & Taxonomy

OrganismCoffea arabica [Plant]

FamilyThaumatin

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial