Peptide Database

Peptide NameToxin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length407 amino acids

Chemical FormulaC1966H3086N554O598S7

DescriptionStandard

        MAGNKDIPRVKNPPSGDGHHVTHRFMTASELAERDARQNTYDAMLARQEAFELSREIAPKRDESVRAGCVFAKSCKLPDAIIDYSNPSGMVPTDSLKDYGEVAWLGAREADDAGLLNLETISGSTLSLGIGRLALSAPTLAAPVAAIGAAGATALATVIALFWTPSLGDSALYTEDQLRALKQARTRVRLQVEQQADGRLKGYGFYTGKNRGWEMVDVVQFTLRDSQQVADLGDGVELIWTPAVDGSDILGIPALEAAPRAPHIWVYPPTKAADGIIVNPVYPPDYKDFILVFPVGSGVQPVYIVVSASGRKLPNPDHDYHSAPETEEITGFSGLREAKKKTPRQGGGGLRERWIDNKGRTIYEWDSLHGELEAYRASDGSHLGSFDHKTGEQIDPPKKNRSIKKYL
    

Molecular Weight44275.34 Da

Isoelectric Point (pI)5.91

Net Charge (pH 7.0)-5.67

Net Charge (pH 7.4) -6.48

Charge Density (pH 7.0) -0.0139

GRAVY Index-0.39

Hydrophobic Moment 0.71

Boman Index-0.01

Instability Index34.33

Aliphatic Index 82.28

Aromaticity 0.0762

Extinction Coeff. Reduced 59360.00

Extinction Coeff. Oxidized 59485.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0198180 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas mandelii [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal