Peptide Database

Peptide NamePathogenesis-related 5 protein Cup a 3 (PR-5 protein Cup a 3), (Pollen protein Cup a 3), (Thaumatin-like protein Cup a 3), (TLP Cup a 3), (allergen Cup a 3), (Fragment)

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length199 amino acids

Chemical FormulaC906H1377N247O298S16

DescriptionStandard

        VKFDIKNQCGYTVWAAGLPGGGKEFDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCRSGDCGGQLSCTVSGAVPATLAEYTQSDQDYYDVSLVDGFNIPLAINPTNTKCTAPACKADINAVCPSELKVDGGCNSACNVLQTDQYCCRNAYVNNCPATNYSKIFKNQCPQAYSYAKDDTATFACASGTDYSIVFCP
    

Molecular Weight21010.14 Da

Isoelectric Point (pI)4.82

Net Charge (pH 7.0)-3.42

Net Charge (pH 7.4) -3.91

Charge Density (pH 7.0) -0.0172

GRAVY Index-0.23

Hydrophobic Moment 0.62

Boman Index0.06

Instability Index38.35

Aliphatic Index 56.48

Aromaticity 0.1055

Extinction Coeff. Reduced 31400.00

Extinction Coeff. Oxidized 32400.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8755.78

LogP -117.82

H-bond Donors 313.0

H-bond Acceptors 311.0

Rotatable Bonds 666.0

Heavy Atoms 1467.0

Ring Count 33.0

Amide Bonds 221.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0281914 VERIFIED: NO

Provenance & Taxonomy

OrganismHesperocyparis arizonica [Plant]

FamilyThaumatin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial