Peptide Database

Peptide NameVv-AMP1

Function Ontology

—

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC119H191N43O44S4

DescriptionStandard

        RTCESQSHRFHGTCVRESNCASVCQTE
    

Molecular Weight3056.31 Da

Isoelectric Point (pI)6.90

Net Charge (pH 7.0)-0.09

Net Charge (pH 7.4) -0.46

Charge Density (pH 7.0) -0.0034

GRAVY Index-0.87

Hydrophobic Moment 0.50

Boman Index-0.31

Instability Index40.80

Aliphatic Index 25.19

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1445.76

LogP -23.24

H-bond Donors 56.0

H-bond Acceptors 50.0

Rotatable Bonds 101.0

Heavy Atoms 210.0

Ring Count 3.0

Amide Bonds 29.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0406369 VERIFIED: YES

Provenance & Taxonomy

OrganismPetunia integrifolia [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)