Peptide Database

Peptide NamePedA15.1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC151H240N42O56S4

DescriptionStandard

        KNAYMNSCITGSNLSCQSAKCDPEESLDNLIFGN
    

Molecular Weight3668.03 Da

Isoelectric Point (pI)4.32

Net Charge (pH 7.0)-2.26

Net Charge (pH 7.4) -2.52

Charge Density (pH 7.0) -0.0666

GRAVY Index-0.44

Hydrophobic Moment 0.42

Boman Index-0.02

Instability Index73.55

Aliphatic Index 63.24

Aromaticity 0.0588

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1616.22

LogP -22.91

H-bond Donors 56.0

H-bond Acceptors 58.0

Rotatable Bonds 123.0

Heavy Atoms 253.0

Ring Count 3.0

Amide Bonds 39.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0043049 VERIFIED: NO

Provenance & Taxonomy

OrganismPedobacter lusitanus NL19 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial