Peptide Database

Peptide NamePeptide chain C in PDB 3HKJ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC58H74N12O18

DescriptionStandard

        NDKYEPFWE
    

Molecular Weight1227.28 Da

Isoelectric Point (pI)4.43

Net Charge (pH 7.0)-2.23

Net Charge (pH 7.4) -2.44

Charge Density (pH 7.0) -0.2478

GRAVY Index-2.10

Hydrophobic Moment 0.34

Boman Index-0.25

Instability Index33.88

Aliphatic Index 0.00

Aromaticity 0.3333

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 6990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 504.36

LogP -2.09

H-bond Donors 16.0

H-bond Acceptors 16.0

Rotatable Bonds 36.0

Heavy Atoms 88.0

Ring Count 5.0

Amide Bonds 9.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0093404 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3HKJ receptor chain B

MethodProtein-peptide complex structure