Peptide Database

Peptide NameARACIN1

Function Ontology

—

Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC173H290N58O58S2

DescriptionStandard

        GSCGAAIAKDDSPQTLAKRPPCRRPRLQNSEDVTHSTLP
    

Molecular Weight4174.64 Da

Isoelectric Point (pI)8.90

Net Charge (pH 7.0)1.83

Net Charge (pH 7.4) 1.54

Charge Density (pH 7.0) 0.0470

GRAVY Index-0.91

Hydrophobic Moment 0.46

Boman Index-0.26

Instability Index92.06

Aliphatic Index 57.69

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1873.57

LogP -26.52

H-bond Donors 66.0

H-bond Acceptors 63.0

Rotatable Bonds 133.0

Heavy Atoms 291.0

Ring Count 6.0

Amide Bonds 41.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0199964 VERIFIED: YES

Provenance & Taxonomy

OrganismBrassica oleracea [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)