Peptide Database

Peptide NamePeptide chain D in PDB 1JPW

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length24 amino acids

Chemical FormulaC108H174N28O42

DescriptionStandard

        GANDELISFKDEGDLADVKSSLVN
    

Molecular Weight2536.70 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-4.23

Net Charge (pH 7.4) -4.44

Charge Density (pH 7.0) -0.1763

GRAVY Index-0.35

Hydrophobic Moment 0.33

Boman Index-0.00

Instability Index3.07

Aliphatic Index 97.50

Aromaticity 0.0417

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1155.33

LogP -13.80

H-bond Donors 38.0

H-bond Acceptors 38.0

Rotatable Bonds 88.0

Heavy Atoms 178.0

Ring Count 1.0

Amide Bonds 25.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0242342 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1JPW receptor chain A

MethodProtein-peptide complex structure