Peptide Database

Peptide NamePsDef1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC183H280N52O56S7

DescriptionStandard

        GYCVSSTNCKNVCRTEGFLTGSCDFHVASRKCYCYKPCP
    

Molecular Weight4328.95 Da

Isoelectric Point (pI)8.56

Net Charge (pH 7.0)2.78

Net Charge (pH 7.4) 2.41

Charge Density (pH 7.0) 0.0712

GRAVY Index-0.26

Hydrophobic Moment 0.44

Boman Index-0.06

Instability Index26.12

Aliphatic Index 34.87

Aromaticity 0.1282

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4845.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1745.16

LogP -22.32

H-bond Donors 69.0

H-bond Acceptors 67.0

Rotatable Bonds 135.0

Heavy Atoms 298.0

Ring Count 8.0

Amide Bonds 40.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0330263 VERIFIED: YES

Provenance & Taxonomy

OrganismPinus taeda [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)