Peptide Database

Peptide NamePeptide chain S in PDB 3AP1

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC54H65N9O23

DescriptionStandard

        EDFEDYEFD
    

Molecular Weight1208.14 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-6.15

Net Charge (pH 7.4) -6.33

Charge Density (pH 7.0) -0.6836

GRAVY Index-1.86

Hydrophobic Moment 0.26

Boman Index-0.25

Instability Index48.64

Aliphatic Index 0.00

Aromaticity 0.3333

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 540.15

LogP -3.27

H-bond Donors 17.0

H-bond Acceptors 17.0

Rotatable Bonds 38.0

Heavy Atoms 86.0

Ring Count 3.0

Amide Bonds 8.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0296818 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3AP1 receptor chain A

MethodProtein-peptide complex structure