Peptide Database

Peptide NamePp-AMP2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC147H252N48O46S6

DescriptionStandard

        KSCCPSTNARNIYNACRLMGTSRPICASLSGCKI
    

Molecular Weight3620.26 Da

Isoelectric Point (pI)9.35

Net Charge (pH 7.0)4.71

Net Charge (pH 7.4) 4.43

Charge Density (pH 7.0) 0.1385

GRAVY Index-0.05

Hydrophobic Moment 0.70

Boman Index-0.07

Instability Index62.01

Aliphatic Index 66.18

Aromaticity 0.0294

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1534.89

LogP -22.29

H-bond Donors 60.0

H-bond Acceptors 57.0

Rotatable Bonds 118.0

Heavy Atoms 247.0

Ring Count 3.0

Amide Bonds 36.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0130536 VERIFIED: YES

Provenance & Taxonomy

OrganismCapsella rubella [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)