Peptide Database

Peptide NamePyocin colicin protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length483 amino acids

Chemical FormulaC2305H3672N654O722S3

DescriptionStandard

        MAEAAERERIEAQVRAQAEKDQAHRLALEALTNAYPSLQSGFAQNYLLASASLPNTLQKEIAPGHDLNVDYPGDKQALELILQKKTSVNYLLATKQPLLEERRTQALSLTGQELDHATQKDHLNYLVHYSQGDPQRVQQAHEAWVNALSQTYQAKLLADSVTLLNEQSAALSMRHAELSLANKTASQDADRTSSRQAAGIDKLWSVIAPASTTTAAPGIRTVATNIAKDQLIRIATRTLGSNLVTLLAMYPQPLGDAELPPAVIATPLSQLNLPPHIDLQYLASVKGTLDVPHRLTSDGADASGAARWVAADGVKVGTKVRVRTFTYNALNNSYEFIRDGESTPALIWTPIAQPADSSTSSPAGPPALPKDTGNVVTPFVPELEAYPAIDRDDPDDYILISPIDSGLPNSYLLFKDPRSIPGVASGYGEAVTGVWLGDRTRAEGASIPTHIADQLRGRRFGDFASLRKATWIAVADDPELGRR
    

Molecular Weight52193.96 Da

Isoelectric Point (pI)5.54

Net Charge (pH 7.0)-9.56

Net Charge (pH 7.4) -10.39

Charge Density (pH 7.0) -0.0198

GRAVY Index-0.31

Hydrophobic Moment 0.78

Boman Index0.01

Instability Index40.81

Aliphatic Index 91.66

Aromaticity 0.0580

Extinction Coeff. Reduced 55350.00

Extinction Coeff. Oxidized 55350.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0129328 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas amygdali pv. lachrymans [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal