Peptide Database

Peptide NamePeptide chain B in PDB 1XOC

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC43H66N12O17

DescriptionStandard

        VDSKNTSSW
    

Molecular Weight1023.05 Da

Isoelectric Point (pI)5.81

Net Charge (pH 7.0)-0.27

Net Charge (pH 7.4) -0.48

Charge Density (pH 7.0) -0.0295

GRAVY Index-1.19

Hydrophobic Moment 0.11

Boman Index-0.21

Instability Index25.56

Aliphatic Index 32.22

Aromaticity 0.1111

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 499.24

LogP -7.51

H-bond Donors 18.0

H-bond Acceptors 17.0

Rotatable Bonds 32.0

Heavy Atoms 72.0

Ring Count 2.0

Amide Bonds 9.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0058983 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1XOC receptor chain A

MethodProtein-peptide complex structure