Peptide Database

Peptide NamePeptide chain E in PDB 5N8B

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length12 amino acids

Chemical FormulaC63H82N14O19

DescriptionStandard

        AFPDYLAEYHGG
    

Molecular Weight1339.41 Da

Isoelectric Point (pI)4.35

Net Charge (pH 7.0)-2.12

Net Charge (pH 7.4) -2.36

Charge Density (pH 7.0) -0.1762

GRAVY Index-0.42

Hydrophobic Moment 0.25

Boman Index0.25

Instability Index30.86

Aliphatic Index 49.17

Aromaticity 0.2500

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 518.37

LogP -2.97

H-bond Donors 17.0

H-bond Acceptors 18.0

Rotatable Bonds 37.0

Heavy Atoms 96.0

Ring Count 5.0

Amide Bonds 11.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0202924 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5N8B receptor chain A

MethodProtein-peptide complex structure