Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC120H192N42O44S4

DescriptionStandard

        RTCESQSHRFKGTCLSETNCANVCHNE
    

Molecular Weight3055.32 Da

Isoelectric Point (pI)6.90

Net Charge (pH 7.0)-0.09

Net Charge (pH 7.4) -0.46

Charge Density (pH 7.0) -0.0034

GRAVY Index-0.97

Hydrophobic Moment 0.45

Boman Index-0.29

Instability Index56.79

Aliphatic Index 28.89

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1432.74

LogP -22.49

H-bond Donors 54.0

H-bond Acceptors 50.0

Rotatable Bonds 102.0

Heavy Atoms 210.0

Ring Count 3.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0130509 VERIFIED: YES

Provenance & Taxonomy

OrganismCamelina sativa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)