Peptide Database

Peptide NamePhytotoxic protein PcF

Function Ontology

Venom / Toxin ▸ General toxin ▸ Toxin

Venom / Toxin ▸ Toxin

Standard StatusStandard

Sequence Length52 amino acids

Chemical FormulaC232H362N66O84S6

DescriptionStandard

        EDPLYCQAIGCPTLYSEANLAVSKECRDQGKLGDDFHRCCEEQCGSTTPASA
    

Molecular Weight5612.14 Da

Isoelectric Point (pI)4.40

Net Charge (pH 7.0)-5.12

Net Charge (pH 7.4) -5.45

Charge Density (pH 7.0) -0.0985

GRAVY Index-0.56

Hydrophobic Moment 0.72

Boman Index-0.09

Instability Index35.43

Aliphatic Index 52.69

Aromaticity 0.0577

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2415.70

LogP -31.37

H-bond Donors 87.0

H-bond Acceptors 86.0

Rotatable Bonds 182.0

Heavy Atoms 388.0

Ring Count 7.0

Amide Bonds 55.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0270095 VERIFIED: YES

Provenance & Taxonomy

OrganismPhytophthora cactorum [Protist]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Disulfide6-40; 11-44; 26-39

Bio-Activity Profile

Function

Toxin Venom