Peptide Database

Peptide NameAGP1_ARATH

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length131 amino acids

Chemical FormulaC563H909N145O177S3

DescriptionStandard

        APGPAQGGAVSNKFASFGSVAVMLTAAVLVIMAFSKSLVFVLLAALLISSAVAQSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSPAAALTPESSASPPSPPLADSPTADSPALSPSAISDSPTE
    

Molecular Weight12637.30 Da

Isoelectric Point (pI)6.42

Net Charge (pH 7.0)-0.19

Net Charge (pH 7.4) -0.40

Charge Density (pH 7.0) -0.0015

GRAVY Index0.31

Hydrophobic Moment 0.48

Boman Index0.24

Instability Index108.97

Aliphatic Index 83.66

Aromaticity 0.0305

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 4854.86

LogP -63.13

H-bond Donors 158.0

H-bond Acceptors 180.0

Rotatable Bonds 371.0

Heavy Atoms 888.0

Ring Count 27.0

Amide Bonds 134.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0231583 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Tax ID3702

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Other ModsGlycosylation reported; GPI-anchor related processing reported

Bio-Activity Profile

Function

Signaling