Peptide Database

Peptide NameGarvicin A

Function Ontology

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Standard StatusStandard

Sequence Length30 amino acids

Chemical FormulaC160H231N45O43S2

DescriptionStandard

        TWANMMNGGGFVNQWQVYANKGKINQYRPY
    

Molecular Weight3536.95 Da

Isoelectric Point (pI)9.82

Net Charge (pH 7.0)2.39

Net Charge (pH 7.4) 2.20

Charge Density (pH 7.0) 0.0798

GRAVY Index-0.89

Hydrophobic Moment 0.39

Boman Index-0.01

Instability Index-2.58

Aliphatic Index 39.00

Aromaticity 0.2000

Extinction Coeff. Reduced 15470.00

Extinction Coeff. Oxidized 15470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1469.59

LogP -14.00

H-bond Donors 49.0

H-bond Acceptors 48.0

Rotatable Bonds 112.0

Heavy Atoms 250.0

Ring Count 9.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0259538 VERIFIED: YES

Provenance & Taxonomy

OrganismLactococcus garvieae [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)