Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC140H220N36O43S6

DescriptionStandard

        CGESCVFIPCLTSLAGCSCKNKVCYYNGLNP
    

Molecular Weight3287.85 Da

Isoelectric Point (pI)7.76

Net Charge (pH 7.0)0.70

Net Charge (pH 7.4) 0.40

Charge Density (pH 7.0) 0.0226

GRAVY Index0.39

Hydrophobic Moment 0.29

Boman Index0.19

Instability Index38.01

Aliphatic Index 72.26

Aromaticity 0.0968

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1258.73

LogP -14.81

H-bond Donors 48.0

H-bond Acceptors 50.0

Rotatable Bonds 102.0

Heavy Atoms 225.0

Ring Count 5.0

Amide Bonds 33.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0138226 VERIFIED: YES

Provenance & Taxonomy

OrganismPalicourea rigida [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)