Peptide Database

Peptide NamePdi2

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length20 amino acids

Chemical FormulaC103H173N35O22

DescriptionStandard

        GKPNKPRPAPIKPRPPHPRL
    

Molecular Weight2253.70 Da

Isoelectric Point (pI)12.00

Net Charge (pH 7.0)5.84

Net Charge (pH 7.4) 5.59

Charge Density (pH 7.0) 0.2922

GRAVY Index-1.75

Hydrophobic Moment 0.33

Boman Index-0.44

Instability Index36.94

Aliphatic Index 44.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 881.43

LogP -7.58

H-bond Donors 27.0

H-bond Acceptors 29.0

Rotatable Bonds 63.0

Heavy Atoms 160.0

Ring Count 9.0

Amide Bonds 20.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0227720 VERIFIED: YES

Provenance & Taxonomy

OrganismPimpla disparis [Animal]

FamilyApidaecin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Non-hemolytic

TargetProteus mirabilis

RECORD: Rec_0320852 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial

FIRST PREV 1 2

Showing 2 records · Page 2 of 2