Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC121H195N45O43S4

DescriptionStandard

        RTCESQSHRFKGTCVRESNCANVCHNE
    

Molecular Weight3096.38 Da

Isoelectric Point (pI)7.91

Net Charge (pH 7.0)0.91

Net Charge (pH 7.4) 0.54

Charge Density (pH 7.0) 0.0336

GRAVY Index-1.09

Hydrophobic Moment 0.45

Boman Index-0.38

Instability Index52.43

Aliphatic Index 25.19

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1474.41

LogP -23.00

H-bond Donors 56.0

H-bond Acceptors 50.0

Rotatable Bonds 104.0

Heavy Atoms 213.0

Ring Count 3.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0046404 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis lyrata [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)