Peptide Database

Peptide NameDefensin Sd2

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length47 amino acids

Chemical FormulaC208H344N76O62S10

DescriptionStandard

        RVCRRRSAGFKGVCMSDHNCAQVCLQEGWGGGNCDGIMRQCKCIRQC
    

Molecular Weight5222.08 Da

Isoelectric Point (pI)8.97

Net Charge (pH 7.0)4.77

Net Charge (pH 7.4) 4.39

Charge Density (pH 7.0) 0.1015

GRAVY Index-0.41

Hydrophobic Moment 0.60

Boman Index-0.20

Instability Index81.67

Aliphatic Index 47.66

Aromaticity 0.0426

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 6000.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2280.73

LogP -30.41

H-bond Donors 89.0

H-bond Acceptors 78.0

Rotatable Bonds 179.0

Heavy Atoms 356.0

Ring Count 4.0

Amide Bonds 52.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0172730 VERIFIED: NO

Provenance & Taxonomy

OrganismSaccharum spp [Plant]

FamilyDefensin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial