Peptide Database

Peptide NameCyclotide vodo I1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC113H179N31O38S6

DescriptionStandard

        GVFCGEACAQASCSIAGCECIAGLCYKN
    

Molecular Weight2772.20 Da

Isoelectric Point (pI)4.53

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0463

GRAVY Index0.76

Hydrophobic Moment 0.30

Boman Index0.29

Instability Index49.98

Aliphatic Index 70.00

Aromaticity 0.0714

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1096.51

LogP -14.34

H-bond Donors 43.0

H-bond Acceptors 43.0

Rotatable Bonds 89.0

Heavy Atoms 188.0

Ring Count 2.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0347484 VERIFIED: NO

Provenance & Taxonomy

OrganismViola odorata [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial